Existing Papers that can be Replicated

• M. E. J. Newman, Phys. Rev. E 74, 036104 (2006).
• M. Girvan and M. E. J. Newman, Proc. Natl. Acad. Sci. USA 99, 7821-7826 (2002).
• L. A. Adamic and N. Glance, "The political blogosphere and the 2004 US Election", in Proceedings of the WWW-2005 Workshop on the Weblogging Ecosystem (2005).
• M. E. J. Newman, The structure of scientific collaboration networks, Proc. Natl. Acad. Sci. USA 98, 404-409 (2001).
• Michael Kearns, Siddharth Suri, Nick Montfort, An Experimental Study of the Coloring Problem on Human Subject Networks Science 11 August 2006: Vol. 313. no. 5788, pp. 824 - 827
  http://www.sciencemag.org/cgi/content/abstract/313/5788/824
• D. J. Watts and S. H. Strogatz. Collective dynamics of 'small-world' networks, Nature, 393:440-442 (1998)
• J. Kleinberg. Navigation in a Small World. Nature 406(2000), 845.
• L. Barabasi and R. Albert "Emergence of scaling in random networks" Science 1999
• Masucci and Rodgers "Network properties of written human language" 2006
• Sole, R. V., Corominas, B., Valverde, S., and Steels, L. (2005) Language Networks: their structure, function and evolution. Trends in Cognitive Sciences.
• Sigman/Cecchi Mariano Sigman and Guillermo A Cecchi. Global organization of the Wordnet lexicon.. Proc Natl Acad Sci U S A, 99(3):1742-7, February 2002
• The Political Blogosphere and the 2004 U.S. Election: Divided They Blog, Lada A. Adamic and Natalie Glance, LinkKDD-2005, Chicago, IL, Aug 21, 2005.
• Friends and Neighbors on the Web, Lada A. Adamic and Eytan Adar, Social Networks, 25(3):211-230, July 2003.
• Graph Evolution: Densification and Shrinking Diameters Jure Leskovec, Jon Kleinberg, Christos Faloutsos. ACM Transactions on Knowledge Discovery from Data (ACM TKDD), 1(1), 2007.
• Cascading Behavior in Large Blog Graphs Jure Leskovec, Mary McGlohon, Christos Faloutsos, Natalie Glance, Matthew Hurst. SIAM International Conference on Data Mining (SDM) 2007
• Graphs over Time: Densification Laws, Shrinking Diameters and Possible Explanations, Jure Leskovec, Jon Klienberg and Christos Faloutsos. ACM August 2005.
  http://www.cs.cornell.edu/home/kleinber/kdd05-time.pdf
• ALIBABA: PubMed as a graph, Conrad Plake, Torsten Schiemann, Marcus Pankalla, Jorg Hakenberg, and Ulf Leser, Vol. 22 no. 19 2006, pages 2444-2445, doi:10.1093/bioinformatics/btl408
  AliBaba.pdf
• Simrank++: Query rewriting through link analysis of the click graph, Ioannis Antonellis, Hector Garcia-Molina, and Chi-Chao Chang
  simrank++.pdf
• Specificity and Stability in Topology of Protein Networks, Sergei Maslov and Kim Sneppen, VOL 296 SCIENCE, www.sciencemag.org, May 3, 2002
  protein_networks_science.pdf
• Protein-protein interaction networks and biology - what's the connection?, Luke Hakes, John W Pinney, David L Robertson and Simon C Lovell, 2008 Nature Publishing Group http://www.nature.com/naturebiotechnology
  nbt0108-69.pdf
• Mining Gene-Disease Relationships From Biomedical Literature: Weighting Protein-Protein Interactions And Connectivity Measures, Graciela Gonzalez, Juan C. Uribe, Luis Tari, Colleen Brophy, and Chitta Baral, Pacific Symposium on Biocomputing 12:28-39(2007)
  gonzalez.pdf
• Detection of topological patterns in complex networks: correlation proÿle of the internet, Sergei Maslova, Kim Sneppenb, Alexei Zaliznyak, Physica A 333 (2004) 529 - 540
  correlation_profile_of_the_internet_physicaA_2004.pdf
• Finding community structure in networks using the eigenvectors of matrices, M. E. J. Newman, arXiv:physics/0605087 v3 23 Jul 2006
  0605087v3.pdf
• Scale-free networks in cell biology, Réka Albert, Journal of Cell Science 118, 4947-4957 Published by The Company of Biologists 2005, doi:10.1242/jcs.02714
  4947.pdf
• A Protein Interaction Map of Drosophila melanogaster, L. Giot, et al., Science 302, 1727 (2003); DOI: 10.1126/science.1090289
  1727.pdf
• Finding and evaluating community structure in networks, M. E. J. Newman and M. Girvan, arXiv:cond-mat/0308217v1, Aug, 11, 2003
  0308217v1.pdf
• Community structure in the United States House of Representatives, Mason A. Porter, Peter J. Mucha, M.E.J. Newman, A.J. Friend Physica A 386 (2007) 414–438
  http://www.amath.unc.edu/Faculty/mucha/Reprints/PhysAconglong.pdf
• Patterns in syntactic dependency networks, Ramon Ferrer Cancho, Ricard V. Solé, and Reinhard Köhler, PHYSICAL REVIEW E 69, 051915 (2004)
  http://complex.upf.es/~ricard/syntaxPRE51915.pdf
• Strong correlations between text quality and complex networks features, L. Antiqueira, M.G.V. Nunes, O.N. Oliveira Jr., and L. da F. Costa. Physica A, June 2006.
• A Protein Interaction Map of Drosophila melanogaster, L. Giot et al (2003) Science 302 (5651), 1727. [DOI: 10.1126/science.1090289]
  http://www.sciencemag.org/cgi/content/full/302/5651/1727
• F Wu, BA Huberman: Finding communities in linear time: a physics approach The European Physical Journal B-Condensed Matter, 2004